3DV4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand KDO, MG, PG4 enzyme
Primary referencePseudo-symmetry and twinning in crystals of homologous antibody Fv fragments., Brooks CL, Blackler RJ, Gerstenbruch S, Kosma P, Muller-Loennies S, Brade H, Evans SV, Acta Crystallogr D Biol Crystallogr. 2008 Dec;64(Pt 12):1250-8. Epub 2008, Nov 18. PMID:19018101
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (3dv4.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 3DV4
  • CSU: Contacts of Structural Units for 3DV4
  • Likely Quarternary Molecular Structure file(s) for 3DV4
  • Structure Factors (150 Kb)
  • Retrieve 3DV4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3DV4 from S2C, [Save to disk]
  • Re-refined 3dv4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3DV4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3dv4] [3dv4_] [3dv4_A] [3dv4_B]
  • SWISS-PROT database:
  • Domain found in 3DV4: [IGv ] by SMART

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