3DYS		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5GP, FMT, IBM, MG, MN BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for the catalytic mechanism of human phosphodiesterase 9., Liu S, Mansour MN, Dillman KS, Perez JR, Danley DE, Aeed PA, Simons SP, Lemotte PK, Menniti FS, Proc Natl Acad Sci U S A. 2008 Sep 9;105(36):13309-14. Epub 2008 Aug 29. PMID:18757755

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk] Biological Unit Coordinates (3dys.pdb1.gz) 115 Kb Biological Unit Coordinates (3dys.pdb2.gz) 115 Kb LPC: Ligand-Protein Contacts for 3DYS CSU: Contacts of Structural Units for 3DYS Likely Quarternary Molecular Structure file(s) for 3DYS Structure Factors (527 Kb) Retrieve 3DYS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DYS from S2C, [Save to disk] Re-refined 3dys structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DYS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dys] [3dys_A] [3dys_B] SWISS-PROT database: [O76083] Domain found in 3DYS: [HDc ] by SMART

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