3E2T Oxidoreductase date Aug 06, 2008
title The Catalytic Domain Of Chicken Tryptophan Hydroxylase 1 Wit Tryptophan
authors M.S.Windahl, C.R.Petersen, H.E.C.Christensen, P.Harris
compound source
Molecule: Tryptophan 5-Hydroxylase 1
Chain: A
Fragment: Catalytic Domain, Unp Residues 101-414
Synonym: Tryptophan 5-Monooxygenase 1
Ec: 1.14.16.4
Engineered: Yes
Organism_scientific: Gallus Gallus
Organism_common: Bantam,Chickens
Organism_taxid: 9031
Strain: White Leghorn
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet26
symmetry Space Group: C 2 2 21
R_factor 0.182 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.000 155.300 61.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand FE, IMD, PGE, SO4, TRP enzyme Oxidoreductase E.C.1.14.16.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal Structure of Tryptophan Hydroxylase with Bound Amino Acid Substrate., Windahl MS, Petersen CR, Christensen HE, Harris P, Biochemistry. 2008 Oct 21. PMID:18937498
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (3e2t.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (3e2t.pdb2.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 3E2T
  • CSU: Contacts of Structural Units for 3E2T
  • Likely Quarternary Molecular Structure file(s) for 3E2T
  • Structure Factors (245 Kb)
  • Retrieve 3E2T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E2T from S2C, [Save to disk]
  • Re-refined 3e2t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3E2T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3E2T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E2T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e2t_A] [3e2t]
  • SWISS-PROT database: [P70080]
  • Domain organization of [TPH1_CHICK] by SWISSPFAM
  • Other resources with information on 3E2T
  • Community annotation for 3E2T at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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