3E48 Structural Genomics, Unknown Function date Aug 11, 2008
title Crystal Structure Of A Nucleoside-Diphosphate-Sugar Epimeras (Sav0421) From Staphylococcus Aureus, Northeast Structural Consortium Target Zr319
authors F.Forouhar, M.Abashidze, J.Seetharaman, L.Mao, H.Janjua, R.Xiao, C.Ciccosanti, E.L.Foote, D.Wang, S.Tong, J.K.Everett, T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomic Consortium (Nesg)
compound source
Molecule: Putative Nucleoside-Diphosphate-Sugar Epimerase
Chain: A, B
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus Subsp. Aureus
Organism_taxid: 158878
Strain: Mu50
Gene: Sav0421
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.086 67.188 141.582 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand MG, MSE enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (3e48.pdb1.gz) 105 Kb
  • LPC: Ligand-Protein Contacts for 3E48
  • CSU: Contacts of Structural Units for 3E48
  • Likely Quarternary Molecular Structure file(s) for 3E48
  • Structure Factors (1032 Kb)
  • Retrieve 3E48 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E48 from S2C, [Save to disk]
  • Re-refined 3e48 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3E48 in 3D
  • Proteopedia, because life has more than 2D.
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    • Visual 3D analysis of 3E48
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E48, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e48] [3e48_B] [3e48_A]
  • SWISS-PROT database: [Q99WI2]
  • Domain organization of [Q99WI2_STAAM] by SWISSPFAM
    • Other resources with information on 3E48
  • Community annotation for 3E48 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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