3E54 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EOH, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • endonuclease activity


    • Primary referenceRecognition of a common rDNA target site in archaea and eukarya by analogous LAGLIDADG and His-Cys box homing endonucleases., Nomura N, Nomura Y, Sussman D, Klein D, Stoddard BL, Nucleic Acids Res. 2008 Dec;36(22):6988-98. Epub 2008 Nov 4. PMID:18984620
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3e54.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 3E54
  • CSU: Contacts of Structural Units for 3E54
  • Likely Quarternary Molecular Structure file(s) for 3E54
  • Structure Factors (229 Kb)
  • Retrieve 3E54 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E54 from S2C, [Save to disk]
  • Re-refined 3e54 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3E54 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e54_B] [3e54_C] [3e54_D] [3e54_E] [3e54_F] [3e54] [3e54_A]
  • SWISS-PROT database: [Q6L703]

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science