3E5A	Transferase	date	Aug 13, 2008
title	Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx
authors	B.Zhao, A.Smallwood, Z.Lai
compound		source
Molecule: Serinethreonine-Protein Kinase 6 Chain: A Fragment: Residues 122-403 Synonym: Aurora Kinase A, Aurora-A, Serinethreonine Kinase Auroraipl1-Related Kinase 1, Aurora-Related Kinase 1, Hark Tumor-Amplified Kinase; Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Aurka, Aik, Ark1, Aura, Btak, Stk15, Stk6 Expression_system: Escherichia Coli Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest17 Tev Aurora A 125-391
Molecule: Targeting Protein For Xklp2 Chain: B Fragment: Residues 1-43 Synonym: Tpx2, Restricted Expression Proliferation-Associat 100, P100, Differentially Expressed In Cancerous And Non-Ca Lung Cells 2, Dil-2, Protein Fls353, Hepatocellular Carcino Associated Antigen 519; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_taxid: 9606 Gene: Tpx2, C20orf1, C20orf2, Dil2, Hca519 Expression_system: Escherichia Coli Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest17 Tev Aurora A 125-391
symmetry	Space Group: C 2 2 21	R_factor 0.203 R_Free 0.256
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.186 89.097 88.499 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	SO4, TPO, VX6 BindingDB	enzyme	Transferase E.C.2.7.11.1 BRENDA
note	3E5A is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Modulation of kinase-inhibitor interactions by auxiliary protein binding: crystallography studies on Aurora A interactions with VX-680 and with TPX2., Zhao B, Smallwood A, Yang J, Koretke K, Nurse K, Calamari A, Kirkpatrick RB, Lai Z, Protein Sci. 2008 Oct;17(10):1791-7. Epub 2008 Jul 28. PMID:18662907

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (3e5a.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 3E5A CSU: Contacts of Structural Units for 3E5A Likely Quarternary Molecular Structure file(s) for 3E5A Structure Factors (147 Kb) Retrieve 3E5A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3E5A from S2C, [Save to disk] Re-refined 3e5a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3E5A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3E5A

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3E5A, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3e5a] [3e5a_B] [3e5a_A] SWISS-PROT database: [O14965] [Q9ULW0] Domain organization of [STK6_HUMAN] [TPX2_HUMAN] by SWISSPFAM Domain found in 3E5A: [S_TKc ] by SMART

Other resources with information on 3E5A

Community annotation for 3E5A at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---