3E6Q Isomerase date Aug 15, 2008
title Putative 5-Carboxymethyl-2-Hydroxymuconate Isomerase From Ps Aeruginosa.
authors J.Osipiuk, X.Xu, H.Cui, A.Savchenko, A.M.Edwards, A.Joachimiak, Mi Center For Structural Genomics (Mcsg)
compound source
Molecule: Putative 5-Carboxymethyl-2-Hydroxymuconate Isomer
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Engineered: Yes
 Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Strain: Pao1
Gene: Pa1966
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b Modified
symmetry Space Group: C 1 2 1
R_factor 0.136 R_Free 0.164
crystal
cell
length a length b length c angle alpha angle beta angle gamma
172.796 145.243 122.252 90.00 134.91 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand ACT, EDO, FMT, GOL, IMD, MSE, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (312 Kb) [Save to disk]
  • Biological Unit Coordinates (3e6q.pdb1.gz) 78 Kb
  • Biological Unit Coordinates (3e6q.pdb2.gz) 76 Kb
  • Biological Unit Coordinates (3e6q.pdb3.gz) 76 Kb
  • Biological Unit Coordinates (3e6q.pdb4.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 3E6Q
  • CSU: Contacts of Structural Units for 3E6Q
  • Likely Quarternary Molecular Structure file(s) for 3E6Q
  • Structure Factors (3926 Kb)
  • Retrieve 3E6Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E6Q from S2C, [Save to disk]
  • Re-refined 3e6q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3E6Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3E6Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3E6Q, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e6q_G] [3e6q_D] [3e6q_A] [3e6q_C] [3e6q_E] [3e6q_J] [3e6q] [3e6q_I] [3e6q_K] [3e6q_F] [3e6q_H] [3e6q_L] [3e6q_B]
  • SWISS-PROT database: [Q9I2D8]
  • Domain organization of [Q9I2D8_PSEAE] by SWISSPFAM
    • Other resources with information on 3E6Q
  • Community annotation for 3E6Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science