3EAB Cell Cycle date Aug 25, 2008
title Crystal Structure Of Spastin Mit In Complex With Escrt III
authors D.Yang, N.Rimanchi, B.Renvoise, J.Lippincott-Schwartz, C.Blackst J.H.Hurley
compound source
Molecule: Spastin
Chain: A, B, C, D, E, F
Fragment: Unp Residues 112 To 196
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Spast, Kiaa1083, Spg4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rossetta
Expression_system_vector_type: Phis2

Molecule: Chmp1b
Chain: G, H, I, J, K, L
Fragment: Unp Residues 145 To 194
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.232 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
151.967 95.493 100.360 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
note 3EAB is a representative structure
Primary referenceStructural basis for midbody targeting of spastin by the ESCRT-III protein CHMP1B., Yang D, Rismanchi N, Renvoise B, Lippincott-Schwartz J, Blackstone C, Hurley JH, Nat Struct Mol Biol. 2008 Dec;15(12):1278-86. Epub 2008 Nov 9. PMID:18997780
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (3eab.pdb1.gz) 22 Kb
  • Biological Unit Coordinates (3eab.pdb2.gz) 21 Kb
  • Biological Unit Coordinates (3eab.pdb3.gz) 22 Kb
  • Biological Unit Coordinates (3eab.pdb4.gz) 21 Kb
  • Biological Unit Coordinates (3eab.pdb5.gz) 21 Kb
  • Biological Unit Coordinates (3eab.pdb6.gz) 21 Kb
  • CSU: Contacts of Structural Units for 3EAB
  • Likely Quarternary Molecular Structure file(s) for 3EAB
  • Structure Factors (314 Kb)
  • Retrieve 3EAB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EAB from S2C, [Save to disk]
  • Re-refined 3eab structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3EAB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3EAB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EAB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3eab_L] [3eab_E] [3eab_B] [3eab_H] [3eab_F] [3eab_J] [3eab_G] [3eab_I] [3eab_D] [3eab_A] [3eab] [3eab_C] [3eab_K]
  • SWISS-PROT database: [Q7LBR1] [Q9UBP0]
  • Domain organization of [CHM1B_HUMAN] [SPAST_HUMAN] by SWISSPFAM
  • Domain found in 3EAB: [MIT ] by SMART
    • Other resources with information on 3EAB
  • Community annotation for 3EAB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science