3EAN Oxidoreductase date Aug 26, 2008
title Crystal Structure Of Recombinant Rat Selenoprotein Thioredox Reductase 1 With Reduced C-Terminal Tail
authors T.Sandalova, Q.Cheng, Y.Lindqvist, E.Arner
compound source
Molecule: Thioredoxin Reductase 1
Chain: A, B, C, D, E, F
Synonym: Tr, Thioredoxin Reductase Tr1, Nadph-Dependent Thi Reductase;
Ec: 1.8.1.9
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Strain: Sprague-Dawley
Gene: Txnrd1, Trxr1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ptrster
symmetry Space Group: P 1 21 1
R_factor 0.207 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.574 140.669 171.167 90.00 94.50 90.00
method X-Ray Diffractionresolution 2.75 Å
ligand FAD, NAP enzyme Oxidoreductase E.C.1.8.1.9 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • thioredoxin-disulfide reduct...


  • Primary referenceCrystal structure and catalysis of the selenoprotein thioredoxin reductase 1., Cheng Q, Sandalova T, Lindqvist Y, Arner ES, J Biol Chem. 2009 Feb 6;284(6):3998-4008. Epub 2008 Dec 3. PMID:19054767
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (465 Kb) [Save to disk]
  • Biological Unit Coordinates (3ean.pdb1.gz) 157 Kb
  • Biological Unit Coordinates (3ean.pdb2.gz) 157 Kb
  • Biological Unit Coordinates (3ean.pdb3.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 3EAN
  • CSU: Contacts of Structural Units for 3EAN
  • Likely Quarternary Molecular Structure file(s) for 3EAN
  • Structure Factors (1453 Kb)
  • Retrieve 3EAN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EAN from S2C, [Save to disk]
  • Re-refined 3ean structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EAN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EAN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EAN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ean_C] [3ean_A] [3ean_F] [3ean_E] [3ean_B] [3ean_] [3ean_D] [3ean]
  • SWISS-PROT database: [O89049]
  • Domain organization of [TRXR1_RAT] by SWISSPFAM
  • Other resources with information on 3EAN
  • Community annotation for 3EAN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science