3EC7 Oxidoreductase date Aug 29, 2008
title Crystal Structure Of Putative Dehydrogenase From Salmonella Typhimurium Lt2
authors Y.Kim, E.Evdokimova, M.Kudritska, A.Savchenko, A.Edwards, A.Joach Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Putative Dehydrogenase
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
 Organism_scientific: Salmonella Typhimurium
Organism_taxid: 99287
Strain: Lt2
Expression_system: Escherichia Coli
Expression_system_strain: Bm21de3
Expression_system_vector_type: Plasmid
symmetry Space Group: P 1
R_factor 0.176 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.001 98.981 105.790 88.05 81.78 89.92
method X-Ray Diffractionresolution 2.15 Å
ligand ACY, EDO, EPE, K, MSE, NAD enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (492 Kb) [Save to disk]
  • Biological Unit Coordinates (3ec7.pdb1.gz) 242 Kb
  • Biological Unit Coordinates (3ec7.pdb2.gz) 126 Kb
  • Biological Unit Coordinates (3ec7.pdb3.gz) 124 Kb
  • Biological Unit Coordinates (3ec7.pdb4.gz) 241 Kb
  • Biological Unit Coordinates (3ec7.pdb5.gz) 125 Kb
  • Biological Unit Coordinates (3ec7.pdb6.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 3EC7
  • CSU: Contacts of Structural Units for 3EC7
  • Likely Quarternary Molecular Structure file(s) for 3EC7
  • Structure Factors (3241 Kb)
  • Retrieve 3EC7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EC7 from S2C, [Save to disk]
  • Re-refined 3ec7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3EC7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3EC7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EC7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ec7_A] [3ec7_F] [3ec7_G] [3ec7_B] [3ec7_D] [3ec7_C] [3ec7_H] [3ec7_E] [3ec7]
  • SWISS-PROT database: [Q8ZK57]
  • Domain organization of [IOLG_SALTY] by SWISSPFAM
    • Other resources with information on 3EC7
  • Community annotation for 3EC7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science