3ECI	Apoptosis	date	Aug 30, 2008
title	Microtubule-Associated Protein 1 Light Chain 3 Alpha Isoform (Map1alc3)
authors	J.R.Walker, T.L.Davis, S.Mujib, C.Butler-Cole, W.Tempel, J.Weigel C.Bountra, C.H.Arrowsmith, A.M.Edwards, A.Botchkarev, S.Dhe-Pag
compound		source
Molecule: Microtubule-Associated Protein 1 Light Chain 3 Al Chain: A, B Synonym: Microtubule-Associated Proteins 1a1b Light Chain Map1amap1b Lc3 A, Map1a1b Light Chain 3 A, Map1 Light Cha Protein 1, Autophagy-Related Protein Lc3 A, Autophagy-Relat Ubiquitin-Like Modifier Lc3 A; Engineered: Yes Other_details: Isoform A (Mapalc3)		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Map1lc3a Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Gold Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-Mhl
symmetry	Space Group: P 42	R_factor 0.233 R_Free 0.304
crystal cell	length a length b length c angle alpha angle beta angle gamma 80.066 80.066 37.089 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.65 Å
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk] Biological Unit Coordinates (3eci.pdb1.gz) 36 Kb Biological Unit Coordinates (3eci.pdb2.gz) 35 Kb CSU: Contacts of Structural Units for 3ECI Likely Quarternary Molecular Structure file(s) for 3ECI Structure Factors (107 Kb) Retrieve 3ECI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3ECI from S2C, [Save to disk] Re-refined 3eci structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3ECI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3ECI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3ECI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3eci_A] [3eci_B] [3eci] SWISS-PROT database: [Q9H492] Domain organization of [MLP3A_HUMAN] by SWISSPFAM

Other resources with information on 3ECI

Community annotation for 3ECI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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