3EDT Motor Protein, Transport Protein date Sep 03, 2008
title Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain
authors H.Zhu, Y.Shen, F.Mackenzie, C.H.Arrowsmith, A.M.Edwards, C.Bountr J.Weigelt, A.Bochkarev, H.Park, Structural Genomics Consortium
compound source
Molecule: Kinesin Light Chain 2
Chain: B, D, F, H
Fragment: Unp Residues 217-480
Synonym: Klc 2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Klc2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Coden(+)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a-Lic
symmetry Space Group: P 31
R_factor 0.230 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
101.202 101.202 115.630 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand UNX enzyme
note 3EDT is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
H, F, D, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (3edt.pdb1.gz) 135 Kb
  • Biological Unit Coordinates (3edt.pdb2.gz) 68 Kb
  • Biological Unit Coordinates (3edt.pdb3.gz) 68 Kb
  • LPC: Ligand-Protein Contacts for 3EDT
  • CSU: Contacts of Structural Units for 3EDT
  • Likely Quarternary Molecular Structure file(s) for 3EDT
  • Structure Factors (537 Kb)
  • Retrieve 3EDT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EDT from S2C, [Save to disk]
  • Re-refined 3edt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EDT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EDT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EDT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3edt_D] [3edt_B] [3edt] [3edt_H] [3edt_F]
  • SWISS-PROT database: [Q9H0B6]
  • Domain organization of [KLC2_HUMAN] by SWISSPFAM
  • Domain found in 3EDT: [TPR ] by SMART
  • Other resources with information on 3EDT
  • Community annotation for 3EDT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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