3EDY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, EDO, NAG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal Structure and Autoactivation Pathway of the Precursor Form of Human Tripeptidyl-peptidase 1, the Enzyme Deficient in Late Infantile Ceroid Lipofuscinosis., Guhaniyogi J, Sohar I, Das K, Stock AM, Lobel P, J Biol Chem. 2009 Feb 6;284(6):3985-97. Epub 2008 Nov 26. PMID:19038967

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (3edy.pdb1.gz) 89 Kb LPC: Ligand-Protein Contacts for 3EDY CSU: Contacts of Structural Units for 3EDY Likely Quarternary Molecular Structure file(s) for 3EDY Structure Factors (355 Kb) Retrieve 3EDY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3EDY from S2C, [Save to disk] Re-refined 3edy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3EDY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3edy] [3edy_A] SWISS-PROT database: [O14773] Domain found in 3EDY: [Pro-kuma_activ ] by SMART

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