3EF5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DGT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and Biological Function of the RNA Pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus., Messing SA, Gabelli SB, Liu Q, Celesnik H, Belasco JG, Pineiro SA, Amzel LM, Structure. 2009 Mar 11;17(3):472-81. PMID:19278661
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3ef5.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3EF5
  • CSU: Contacts of Structural Units for 3EF5
  • Likely Quarternary Molecular Structure file(s) for 3EF5
  • Structure Factors (195 Kb)
  • Retrieve 3EF5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EF5 from S2C, [Save to disk]
  • Re-refined 3ef5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EF5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ef5] [3ef5_A] [3ef5_B]
  • SWISS-PROT database: [Q6MPX4]

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