OCA Atlas for 3EFK

3EFK

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MT4 BindingDB

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Design, synthesis, and biological evaluation of potent c-Met inhibitors., D'Angelo ND, Bellon SF, Booker SK, Cheng Y, Coxon A, Dominguez C, Fellows I, Hoffman D, Hungate R, Kaplan-Lefko P, Lee MR, Li C, Liu L, Rainbeau E, Reider PJ, Rex K, Siegmund A, Sun Y, Tasker AS, Xi N, Xu S, Yang Y, Zhang Y, Burgess TL, Dussault I, Kim TS, J Med Chem. 2008 Sep 25;51(18):5766-79. PMID:18763753

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]

Biological Unit Coordinates (3efk.pdb1.gz) 89 Kb

Biological Unit Coordinates (3efk.pdb2.gz) 46 Kb

Biological Unit Coordinates (3efk.pdb3.gz) 46 Kb

LPC: Ligand-Protein Contacts for 3EFK

CSU: Contacts of Structural Units for 3EFK

Likely Quarternary Molecular Structure file(s) for 3EFK

Structure Factors (395 Kb)

Retrieve 3EFK in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3EFK from S2C, [Save to disk]

Re-refined 3efk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3EFK in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3efk] [3efk_A] [3efk_B]

SWISS-PROT database: [P08581]

Domain found in 3EFK: [TyrKc ] by SMART

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