3EH2 Protein Transport date Sep 11, 2008
title Crystal Structure Of The Human Copii-Coat Protein Sec24c
authors J.Goldberg, J.D.Mancias
compound source
Molecule: Protein Transport Protein Sec24c
Chain: A, B, C
Fragment: Conserved Core, Unp Residues 329-1094
Synonym: Sec24-Related Protein C
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sec24c
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 21
R_factor 0.241 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.690 182.980 201.830 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructural basis of cargo membrane protein discrimination by the human COPII coat machinery., Mancias JD, Goldberg J, EMBO J. 2008 Oct 9. PMID:18843296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (357 Kb) [Save to disk]
  • Biological Unit Coordinates (3eh2.pdb1.gz) 122 Kb
  • Biological Unit Coordinates (3eh2.pdb2.gz) 119 Kb
  • Biological Unit Coordinates (3eh2.pdb3.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 3EH2
  • CSU: Contacts of Structural Units for 3EH2
  • Likely Quarternary Molecular Structure file(s) for 3EH2
  • Structure Factors (913 Kb)
  • Retrieve 3EH2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EH2 from S2C, [Save to disk]
  • Re-refined 3eh2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3EH2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3EH2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3EH2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3eh2_A] [3eh2_C] [3eh2] [3eh2_B]
  • SWISS-PROT database: [P53992]
  • Domain organization of [SC24C_HUMAN] by SWISSPFAM
    • Other resources with information on 3EH2
  • Community annotation for 3EH2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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