3EU9 Protein Binding, Methyl-Lysine-Binding P date Oct 09, 2008
title The Ankyrin Repeat Domain Of Huntingtin Interacting Protein
authors T.Gao, R.E.Collins, J.R.Horton, R.Zhang, X.Zhang, X.Cheng
compound source
Molecule: Huntingtin-Interacting Protein 14
Chain: A, B, C
Fragment: Ankyrin Repeats
Synonym: Hip14, Palmitoyltransferase Zdhhc17, Zinc Finger D Domain-Containing Protein 17, Dhhc-17, Huntingtin-Interacti 3, Huntingtin-Interacting Protein H, Huntingtin Yeast Partn Putative Nf-Kappa-B-Activating Protein 205, Putative Mapk-A Protein Pm11;
Ec: 2.3.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zdhhc17, Hip14, Hip3, Hyph, Kiaa0946, Hspc294
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Pet28b
Expression_system_plasmid: Pxc650
symmetry Space Group: P 61 2 2
R_factor 0.222 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.660 106.660 255.530 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.99 Å
ligand GOL, HIS, SO4 enzyme Transferase E.C.2.3.1 BRENDA
Primary referenceThe ankyrin repeat domain of Huntingtin interacting protein 14 contains a surface aromatic cage, a potential site for methyl-lysine binding., Gao T, Collins RE, Horton JR, Zhang X, Zhang R, Dhayalan A, Tamas R, Jeltsch A, Cheng X, Proteins. 2009 Aug 15;76(3):772-7. PMID:19434754
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (3eu9.pdb1.gz) 223 Kb
  • Biological Unit Coordinates (3eu9.pdb2.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 3EU9
  • CSU: Contacts of Structural Units for 3EU9
  • Likely Quarternary Molecular Structure file(s) for 3EU9
  • Structure Factors (844 Kb)
  • Retrieve 3EU9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EU9 from S2C, [Save to disk]
  • Re-refined 3eu9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EU9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EU9
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3EU9, from MSDmotif at EBI
  • Fold representative 3eu9 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3eu9] [3eu9_A] [3eu9_C] [3eu9_B]
  • SWISS-PROT database: [Q8IUH5]
  • Belongs to the huntington-interacting protein 14 (hip14) family according to TCDB.
  • Domain organization of [ZDH17_HUMAN] by SWISSPFAM
  • Domain found in 3EU9: [ANK ] by SMART
  • Other resources with information on 3EU9
  • Community annotation for 3EU9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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