3EXX Hormone date Oct 17, 2008
title Structure Of The T6 Human Insulin Derivative With Nickel At Resolution
authors B.Prugovecki, D.Matkovic-Calogovic
compound source
Molecule: Insulin A Chain
Chain: A, C
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: Insulin B Chain
Chain: B, D

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: H 3
R_factor 0.124 R_Free 0.171
crystal
cell
length a length b length c angle alpha angle beta angle gamma
81.411 81.411 33.752 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.35 Å
ligand NA, NI enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (3exx.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (3exx.pdb2.gz) 20 Kb
  • LPC: Ligand-Protein Contacts for 3EXX
  • CSU: Contacts of Structural Units for 3EXX
  • Likely Quarternary Molecular Structure file(s) for 3EXX
  • Structure Factors (272 Kb)
  • Retrieve 3EXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EXX from S2C, [Save to disk]
  • Re-refined 3exx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EXX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3EXX, from MSDmotif at EBI
  • Fold representative 3exx from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3exx_C] [3exx_B] [3exx_D] [3exx_A] [3exx]
  • SWISS-PROT database: [P01308]
  • Domain organization of [INS_HUMAN] by SWISSPFAM
  • Domain found in 3EXX: [IlGF ] by SMART
  • Alignments of the sequence of 3EXX with the sequences similar proteins can be viewed for 3EXX's classification [INS_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [INS_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3EXX
  • Community annotation for 3EXX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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