3EYH Transferase date Oct 20, 2008
title Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
authors N.K.Williams, R.S.Bamert, O.Patell, C.Wang, P.M.Walden, E.Fantino
compound source
Molecule: Tyrosine-Protein Kinase
Chain: A
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak1, Hcg_22179
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.174 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.000 88.220 145.520 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand IZA, PTR BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDissecting specificity in the Janus kinases: the structures of JAK-specific inhibitors complexed to the JAK1 and JAK2 protein tyrosine kinase domains., Williams NK, Bamert RS, Patel O, Wang C, Walden PM, Wilks AF, Fantino E, Rossjohn J, Lucet IS, J Mol Biol. 2009 Mar 20;387(1):219-32. Epub 2009 Jan 29. PMID:19361440
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (3eyh.pdb1.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 3EYH
  • CSU: Contacts of Structural Units for 3EYH
  • Likely Quarternary Molecular Structure file(s) for 3EYH
  • Structure Factors (290 Kb)
  • Retrieve 3EYH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3EYH from S2C, [Save to disk]
  • Re-refined 3eyh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3EYH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3EYH
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3EYH, from MSDmotif at EBI
  • Fold representative 3eyh from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3eyh] [3eyh_A]
  • SWISS-PROT database: [P23458]
  • Domain organization of [JAK1_HUMAN] by SWISSPFAM
  • Domain found in 3EYH: [TyrKc ] by SMART
  • Other resources with information on 3EYH
  • Community annotation for 3EYH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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