3F06 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B3N, BME, K, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors., Dowling DP, Gantt SL, Gattis SG, Fierke CA, Christianson DW, Biochemistry. 2008 Dec 23;47(51):13554-63. PMID:19053282
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (3f06.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (3f06.pdb2.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 3F06
  • CSU: Contacts of Structural Units for 3F06
  • Likely Quarternary Molecular Structure file(s) for 3F06
  • Structure Factors (194 Kb)
  • Retrieve 3F06 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F06 from S2C, [Save to disk]
  • Re-refined 3f06 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3F06 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f06] [3f06_A] [3f06_B]
  • SWISS-PROT database: [Q9BY41]

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