3F2N Transferase date Oct 30, 2008
title Crystal Structure Of Human Haspin With An Imidazo-Pyridazine
authors P.Filippakopoulos, J.Eswaran, T.Keates, N.Burgess-Brown, O.Fedor W.W.Yue, J.W.Murray, A.C.W.Pike, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C.Bountra, S.Knapp, Structural Genomics Consortium (Sgc)
compound source
Molecule: Serinethreonine-Protein Kinase Haspin
Chain: A
Fragment: Protein Kinase, Residues 471-798
Synonym: Gsg2, Haploid Germ Cell-Specific Nuclear Protein K Haspin, Germ Cell-Specific Gene 2 Protein;
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Haspin
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)-R3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic28-Bsa4
symmetry Space Group: P 21 21 21
R_factor 0.161 R_Free 0.186
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.416 77.307 85.575 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand EDO, IZZ, PO4 enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (3f2n.pdb1.gz) 61 Kb
  • LPC: Ligand-Protein Contacts for 3F2N
  • CSU: Contacts of Structural Units for 3F2N
  • Likely Quarternary Molecular Structure file(s) for 3F2N
  • Structure Factors (591 Kb)
  • Retrieve 3F2N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F2N from S2C, [Save to disk]
  • Re-refined 3f2n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3F2N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3F2N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3F2N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f2n_A] [3f2n]
  • SWISS-PROT database: [Q8TF76]
  • Domain organization of [HASP_HUMAN] by SWISSPFAM
  • Domains found in 3F2N: [DUF3635] [STYKc ] by SMART
  • Other resources with information on 3F2N
  • Community annotation for 3F2N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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