3F3Z Transferase, Kinase date Oct 31, 2008
title Crystal Structure Of Cryptosporidium Parvum Calcium Dependen Kinase Cgd7_1840 In Presence Of Indirubin E804
authors A.K.Wernimont, J.Lew, G.Wasney, I.Kozieradzki, D.Cossar, M.Vedadi A.Bochkarev, C.H.Arrowsmith, M.Sundstrom, J.Weigelt, A.M.Edward J.D.Artz, M.Amani, Structural Genomics Consortium (Sgc)
compound source
Molecule: Calciumcalmodulin-Dependent Protein Kinase With Domain And 4 Calmodulin Like Ef Hands;
Chain: A
Engineered: Yes
 Organism_scientific: Cryptosporidium Parvum Iowa II
Organism_taxid: 353152
Gene: Cgd7_1840
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh5a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P15-Mhl
symmetry Space Group: C 1 2 1
R_factor 0.187 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.316 82.864 62.151 90.00 111.61 90.00
method X-Ray Diffractionresolution 1.84 Å
ligand DRK, GOL, SEP enzyme
Gene CGD7
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (3f3z.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 3F3Z
  • CSU: Contacts of Structural Units for 3F3Z
  • Structure Factors (580 Kb)
  • Retrieve 3F3Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F3Z from S2C, [Save to disk]
  • Re-refined 3f3z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3F3Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3F3Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3F3Z, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f3z_A] [3f3z]
  • SWISS-PROT database: [Q5CYL9]
  • Domain organization of [Q5CYL9_CRYPV] by SWISSPFAM
  • Domain found in 3F3Z: [S_TKc ] by SMART
    • Other resources with information on 3F3Z
  • Community annotation for 3F3Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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