3F6Q	Signaling Protein Signaling Protein	date	Nov 06, 2008
title	Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat D Complex With Pinch1 Lim1 Domain
authors	B.P.Chiswell, D.A.Calderwood, T.J.Boggon
compound		source
Molecule: Integrin-Linked Protein Kinase Chain: A Fragment: Unp Residues 1-170, Ankyrin Repeat Domain Synonym: Ilk-1, Ilk-2, 59 Kda Serinethreonine-Protein Kina P59ilk; Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ilk, Ilk1, Ilk2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Pgex-4t-1
Molecule: Lim And Senescent Cell Antigen-Like-Containing Do Protein 1; Chain: B Fragment: Unp Residues 6-68, Lim1 Domain Synonym: Particularly Interesting New Cys-His Protein 1, Pi Renal Carcinoma Antigen Ny-Ren-48; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Lims1, Pinch, Pinch1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Expression_system_vector_type: Pet-32
symmetry	Space Group: P 1	R_factor 0.161 R_Free 0.199
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.004 41.500 46.469 78.01 68.98 85.91
method	X-Ray Diffraction	resolution	1.60 Å
ligand	IOD, PO4, ZN	enzyme	Transferase E.C.2.7.11.1 BRENDA
note	3F6Q is a representative structure
Primary reference	The structural basis of integrin-linked kinase-PINCH interactions., Chiswell BP, Zhang R, Murphy JW, Boggon TJ, Calderwood DA, Proc Natl Acad Sci U S A. 2008 Dec 30;105(52):20677-82. Epub 2008 Dec 12. PMID:19074270

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (3f6q.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 3F6Q CSU: Contacts of Structural Units for 3F6Q Likely Quarternary Molecular Structure file(s) for 3F6Q Structure Factors (450 Kb) Retrieve 3F6Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3F6Q from S2C, [Save to disk] Re-refined 3f6q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F6Q in 3D

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Visual 3D analysis of 3F6Q

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3F6Q, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f6q_A] [3f6q] [3f6q_B] SWISS-PROT database: [Q13418] [P48059] Domain organization of [ILK_HUMAN] [LIMS1_HUMAN] by SWISSPFAM Domains found in 3F6Q: [ANK] [LIM ] by SMART

Other resources with information on 3F6Q

Community annotation for 3F6Q at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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