3FAK Hydrolase date Nov 17, 2008
title Structural And Functional Analysis Of A Hormone-Sensitive Lipase Like Este5 From A Metagenome Library
authors K.Y.Hwang, K.H.Nam
compound source
Molecule: Esteraselipase
Chain: A
Synonym: Este5
Ec: 3.1.1.-
Engineered: Yes
Organism_scientific: Uncultured Bacterium
Organism_taxid: 77133
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_plasmid: Pet-21a
Other_details: Soil Metaggenome Library
symmetry Space Group: P 41 21 2
R_factor 0.214 R_Free 0.243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.996 60.996 149.282 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CL, NA enzyme Hydrolase E.C.3.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional analysis of a novel EstE5 belonging to the subfamily of hormone-sensitive lipase., Nam KH, Kim MY, Kim SJ, Priyadarshi A, Lee WH, Hwang KY, Biochem Biophys Res Commun. 2009 Feb 6;379(2):553-6. Epub 2008 Dec 29. PMID:19116143
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (3fak.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 3FAK
  • CSU: Contacts of Structural Units for 3FAK
  • Likely Quarternary Molecular Structure file(s) for 3FAK
  • Structure Factors (278 Kb)
  • Retrieve 3FAK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FAK from S2C, [Save to disk]
  • Re-refined 3fak structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FAK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FAK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FAK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fak] [3fak_A]
  • SWISS-PROT database: [Q0GMU2]
  • Domain organization of [Q0GMU2_9BACT] by SWISSPFAM
  • Other resources with information on 3FAK
  • Community annotation for 3FAK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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