3FDK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand KCX, ZN enzyme
Gene DR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctional annotation and three-dimensional structure of Dr0930 from Deinococcus radiodurans, a close relative of phosphotriesterase in the amidohydrolase superfamily., Xiang DF, Kolb P, Fedorov AA, Meier MM, Fedorov LV, Nguyen TT, Sterner R, Almo SC, Shoichet BK, Raushel FM, Biochemistry. 2009 Mar 17;48(10):2237-47. PMID:19159332
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (3fdk.pdb1.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 3FDK
  • CSU: Contacts of Structural Units for 3FDK
  • Likely Quarternary Molecular Structure file(s) for 3FDK
  • Structure Factors (525 Kb)
  • Retrieve 3FDK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FDK from S2C, [Save to disk]
  • Re-refined 3fdk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FDK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fdk] [3fdk_A]
  • SWISS-PROT database: [Q9RVU2]

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