3FDL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 3FDL is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh-Resolution Structural Characterization of a Helical alpha/beta-Peptide Foldamer Bound to the Anti-Apoptotic Protein Bcl-x(L)., Lee EF, Sadowsky JD, Smith BJ, Czabotar PE, Peterson-Kaufman KJ, Colman PM, Gellman SH, Fairlie WD, Angew Chem Int Ed Engl. 2009 Feb 19. PMID:19229915
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (3fdl.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (3fdl.pdb2.gz) 63 Kb
  • CSU: Contacts of Structural Units for 3FDL
  • Likely Quarternary Molecular Structure file(s) for 3FDL
  • Structure Factors (215 Kb)
  • Retrieve 3FDL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FDL from S2C, [Save to disk]
  • Re-refined 3fdl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3FDL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fdl] [3fdl_A] [3fdl_B]
  • SWISS-PROT database: [Q07817] [O43521]
  • Belongs to the bcl-2 (bcl-2) family according to TCDB.
  • Belongs to the pro-apoptotic bcl-2-family protein bim (bim) family according to TCDB.
  • Domains found in 3FDL: [BCL] [BH4 ] by SMART

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