3FF6	Ligase	date	Dec 02, 2008
title	Human Acc2 Ct Domain With Cp-640186
authors	S.P.Williams, K.P.Madauss, W.A.Burkhart
compound		source
Molecule: Acetyl-Coa Carboxylase 2 Chain: A, B, C, D Fragment: Carboxytransferase Domain, Unp Residues 1693-2450 Synonym: Acc-Beta, Biotin Carboxylase Ec: 6.4.1.2, 6.3.4.14 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Acacb, Acc2, Accb Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pacc2_4
symmetry	Space Group: P 21 21 21	R_factor 0.197 R_Free 0.251
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.545 168.836 293.353 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.19 Å
ligand	RCP BindingDB	enzyme	Ligase E.C.6.4.1.2 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The human ACC2 CT-domain C-terminus is required for full functionality and has a novel twist., Madauss KP, Burkhart WA, Consler TG, Cowan DJ, Gottschalk WK, Miller AB, Short SA, Tran TB, Williams SP, Acta Crystallogr D Biol Crystallogr. 2009 May;65(Pt 5):449-61. Epub 2009, Apr 18. PMID:19390150

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (451 Kb) [Save to disk] Biological Unit Coordinates (3ff6.pdb1.gz) 225 Kb Biological Unit Coordinates (3ff6.pdb2.gz) 224 Kb LPC: Ligand-Protein Contacts for 3FF6 CSU: Contacts of Structural Units for 3FF6 Likely Quarternary Molecular Structure file(s) for 3FF6 Structure Factors (1002 Kb) Retrieve 3FF6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FF6 from S2C, [Save to disk] Re-refined 3ff6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FF6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FF6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FF6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ff6_D] [3ff6_A] [3ff6_C] [3ff6_B] [3ff6] SWISS-PROT database: [O00763] Domain organization of [ACACB_HUMAN] by SWISSPFAM

Other resources with information on 3FF6

Community annotation for 3FF6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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