3FJU Hydrolase Hydrolase Inhibitor date Dec 15, 2008
title Ascaris Suum Carboxypeptidase Inhibitor In Complex With Huma Carboxypeptidase A1
authors L.Sanglas, F.X.Aviles, R.Huber, F.X.Gomis-Ruth, J.L.Arolas
compound source
Molecule: Carboxypeptidase A1
Chain: A
Fragment: Unp Residues 112-418
Ec: 3.4.17.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cpa1, Cpa
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
Expression_system_strain: Km71
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Ppic9

Molecule: Carboxypeptidase A Inhibitor
Chain: B
Engineered: Yes

Organism_scientific: Ascaris Suum
Organism_common: Pig Roundworm
Organism_taxid: 6253
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: De3 Origami2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-32a
symmetry Space Group: P 21 21 21
R_factor 0.157 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.470 78.700 84.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand ACT, CAC, NA, ZN enzyme Hydrolase E.C.3.4.17.1 BRENDA
note 3FJU is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceMammalian metallopeptidase inhibition at the defense barrier of Ascaris parasite., Sanglas L, Aviles FX, Huber R, Gomis-Ruth FX, Arolas JL, Proc Natl Acad Sci U S A. 2009 Jan 28. PMID:19179285
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (3fju.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 3FJU
  • CSU: Contacts of Structural Units for 3FJU
  • Likely Quarternary Molecular Structure file(s) for 3FJU
  • Structure Factors (844 Kb)
  • Retrieve 3FJU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FJU from S2C, [Save to disk]
  • Re-refined 3fju structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FJU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FJU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FJU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fju_B] [3fju_A] [3fju]
  • SWISS-PROT database: [P15085] [P19399]
  • Domain organization of [CBPA1_HUMAN] [ICAA_ASCSU] by SWISSPFAM
  • Domain found in 3FJU: [Zn_pept ] by SMART
  • Other resources with information on 3FJU
  • Community annotation for 3FJU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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