3FNV	Metal Binding Protein	date	Dec 26, 2008
title	Crystal Structure Of Miner1: The Redox-Active 2fe-2s Protein In Wolfram Syndrome 2
authors	A.R.Conlan, H.L.Axelrod, A.E.Cohen, E.C.Abresch, D.Yee, J.Zuris, R.Nechushtai, P.A.Jennings, M.L.Paddock
compound		source
Molecule: Cdgsh Iron Sulfur Domain-Containing Protein 2 Chain: A, B Fragment: C-Terminal Water-Soluble Domain: Unp Residues 57- Synonym: Endoplasmic Reticulum Intermembrane Small Protein, Related 1 Protein, Miner1; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdgsh2, Cisd2, Eris, Zcd2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28a(+)
symmetry	Space Group: P 21 21 21	R_factor 0.170 R_Free 0.216
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.904 48.579 74.104 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	FES	enzyme
Primary reference	Crystal Structure of Miner1: The Redox-active 2Fe-2S Protein Causative in Wolfram Syndrome 2., Conlan AR, Axelrod HL, Cohen AE, Abresch EC, Zuris J, Yee D, Nechushtai R, Jennings PA, Paddock ML, J Mol Biol. 2009 Jul 4. PMID:19580816

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (3fnv.pdb1.gz) 23 Kb LPC: Ligand-Protein Contacts for 3FNV CSU: Contacts of Structural Units for 3FNV Structure Factors (7569 Kb) Retrieve 3FNV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FNV from S2C, [Save to disk] Re-refined 3fnv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FNV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 3FNV

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3FNV, from MSDmotif at EBI Fold representative 3fnv from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fnv_A] [3fnv_B] SWISS-PROT database: [Q8N5K1] Domain organization of [CISD2_HUMAN] by SWISSPFAM Domain found in 3FNV: [ZnF_CDGSH ] by SMART Alignments of the sequence of 3FNV with the sequences similar proteins can be viewed for 3FNV's classification [CISD2_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [CISD2_HUMAN] at ProtoMap. Click on the Cluster number.

Other resources with information on 3FNV

Community annotation for 3FNV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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