3FPU	Immune System	date	Jan 06, 2009
title	The Crystallographic Structure Of The Complex Between Evasin Ccl3
authors	J.P.Shaw, J.M.Dias
compound		source
Molecule: Evasin-1 Chain: A Engineered: Yes		Organism_scientific: Rhipicephalus Sanguineus Organism_common: Brown Dog Tick Organism_taxid: 34632 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pfastbac
Molecule: C-C Motif Chemokine 3 Chain: B Synonym: Small-Inducible Cytokine A3, Macrophage Inflammato 1-Alpha, Mip-1-Alpha, Tonsillar Lymphocyte Ld78 Alpha Prote Switch Regulatory Protein 19-1, G0s19-1 Protein, Sis-Beta, Mip-1-Alpha(4-69), Ld78-Alpha(4-69); Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet30a
symmetry	Space Group: P 43 3 2	R_factor 0.231 R_Free 0.285
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.384 104.384 104.384 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.76 Å
ligand	NI	enzyme
Gene Ontology	Chain Function Process Component A B CCR1 chemokine receptor bind... chemoattractant activity
Primary reference	Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3., Dias JM, Losberger C, Deruaz M, Power CA, Proudfoot AE, Shaw JP, PLoS One. 2009 Dec 30;4(12):e8514. PMID:20041127

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk] Biological Unit Coordinates (3fpu.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 3FPU CSU: Contacts of Structural Units for 3FPU Structure Factors (290 Kb) Retrieve 3FPU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FPU from S2C, [Save to disk] Re-refined 3fpu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FPU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FPU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FPU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fpu] [3fpu_A] [3fpu_B] SWISS-PROT database: [P10147] [P0C8E7] Domain organization of [CCL3_HUMAN] [EVA1_RHISA] by SWISSPFAM Domain found in 3FPU: [SCY ] by SMART

Other resources with information on 3FPU

Community annotation for 3FPU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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