3FRN Structural Genomics, Unknown Function date Jan 08, 2009
title Crystal Structure Of Flagellar Protein Flga From Thermotoga Msb8
authors Y.Patskovsky, J.B.Bonanno, R.Romero, M.Gilmore, S.Hu, K.Bain, J.Ko J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound source
Molecule: Flagellar Protein Flga
Chain: A
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Gene: Tm_1541
symmetry Space Group: P 1 21 1
R_factor 0.241 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.087 28.631 95.530 90.00 106.83 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand GOL enzyme
Gene TM
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3frn.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3FRN
  • CSU: Contacts of Structural Units for 3FRN
  • Likely Quarternary Molecular Structure file(s) for 3FRN
  • Structure Factors (331 Kb)
  • Retrieve 3FRN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FRN from S2C, [Save to disk]
  • Re-refined 3frn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FRN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FRN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3FRN, from MSDmotif at EBI
  • Fold representative 3frn from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3frn_A] [3frn]
  • SWISS-PROT database: [Q9X1M7]
  • Domain organization of [Q9X1M7_THEMA] by SWISSPFAM
  • Domain found in 3FRN: [SAF ] by SMART
  • Other resources with information on 3FRN
  • Community annotation for 3FRN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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