3FW2 Oxidoreductase date Jan 16, 2009
title C-Terminal Domain Of Putative Thiol-Disulfide Oxidoreductase Bacteroides Thetaiotaomicron.
authors J.Osipiuk, H.Li, G.Cobb, A.Joachimiak, Midwest Center For Struct Genomics (Mcsg)
compound source
Molecule: Thiol-Disulfide Oxidoreductase
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Bacteroides Thetaiotaomicron
Organism_taxid: 818
Strain: Vpi-5482
Gene: Bt_2845
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg19
symmetry Space Group: P 21 21 21
R_factor 0.164 R_Free 0.204
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.441 96.704 116.489 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.74 Å
ligand ACT, EDO, MSE enzyme
Gene BT
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (3fw2.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (3fw2.pdb2.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 3FW2
  • CSU: Contacts of Structural Units for 3FW2
  • Likely Quarternary Molecular Structure file(s) for 3FW2
  • Structure Factors (1296 Kb)
  • Retrieve 3FW2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FW2 from S2C, [Save to disk]
  • Re-refined 3fw2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FW2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FW2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FW2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fw2_B] [3fw2] [3fw2_C] [3fw2_A] [3fw2_D]
  • SWISS-PROT database: [Q8A3V9]
  • Domain organization of [Q8A3V9_BACTN] by SWISSPFAM
  • Other resources with information on 3FW2
  • Community annotation for 3FW2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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