3FZ1	Transferase	date	Jan 23, 2009
title	Crystal Structure Of A Benzthiophene Inhibitor Bound To Huma Dependent Kinase-2 (Cdk-2)
authors	R.G.Kurumbail, N.Caspers
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: A Synonym: P33 Protein Kinase Ec: 2.7.11.22 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdk2, Cdk2_human Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_strain: Sf21 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.210 R_Free 0.259
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.717 71.709 72.242 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	B98	enzyme	Transferase E.C.2.7.11.22 BRENDA
Gene	CDK2 (H. sapiens)
Gene Ontology	Chain Function Process Component A
Primary reference	Benzothiophene inhibitors of MK2. Part 2: improvements in kinase selectivity and cell potency., Anderson DR, Meyers MJ, Kurumbail RG, Caspers N, Poda GI, Long SA, Pierce BS, Mahoney MW, Mourey RJ, Parikh MD, Bioorg Med Chem Lett. 2009 Aug 15;19(16):4882-4. Epub 2009 Feb 8. PMID:19616942

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk] Biological Unit Coordinates (3fz1.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 3FZ1 CSU: Contacts of Structural Units for 3FZ1 Likely Quarternary Molecular Structure file(s) for 3FZ1 Structure Factors (335 Kb) Retrieve 3FZ1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FZ1 from S2C, [Save to disk] Re-refined 3fz1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FZ1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FZ1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FZ1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fz1] [3fz1_A] SWISS-PROT database: [P24941] Domain organization of [CDK2_HUMAN] by SWISSPFAM Domain found in 3FZ1: [S_TKc ] by SMART

Other resources with information on 3FZ1

Community annotation for 3FZ1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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