3G4A	Crystal structure of flavine dependant thymidylate synthase S88A mutant from Thermotoga maritima at 1.95 angstrom resolution	date
authors	Mathews, I.I., Lesley, S.A., Kohen, A.
compound		source
symmetry		R_factor R_Free 0.22173
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.95
ligand	FAD, UMP	enzyme
Gene	TM
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	An unusual mechanism of thymidylate biosynthesis in organisms containing the thyX gene., Koehn EM, Fleischmann T, Conrad JA, Palfey BA, Lesley SA, Mathews II, Kohen A, Nature. 2009 Apr 16;458(7240):919-23. PMID:19370033

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk] Biological Unit Coordinates (3g4a.pdb1.gz) 147 Kb LPC: Ligand-Protein Contacts for 3G4A CSU: Contacts of Structural Units for 3G4A Likely Quarternary Molecular Structure file(s) for 3G4A Structure Factors (950 Kb) Retrieve 3G4A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3G4A from S2C, [Save to disk] Re-refined 3g4a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3G4A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3G4A

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3G4A, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3g4a_D] [3g4a_B] [3g4a_A] [3g4a_C] [3g4a] SWISS-PROT database: [Q9WYT0] Domain organization of [THYX_THEMA] by SWISSPFAM

Other resources with information on 3G4A

Community annotation for 3G4A at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---