3G6R GR DNA binding domain:FKBP5 complex-52, 18bp date
authors Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.
compound source
symmetry
R_factor
R_Free 0.2382
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDNA binding site sequence directs glucocorticoid receptor structure and activity., Meijsing SH, Pufall MA, So AY, Bates DL, Chen L, Yamamoto KR, Science. 2009 Apr 17;324(5925):407-10. PMID:19372434
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (3g6r.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 3G6R
  • CSU: Contacts of Structural Units for 3G6R
  • Likely Quarternary Molecular Structure file(s) for 3G6R
  • Structure Factors (135 Kb)
  • Retrieve 3G6R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3G6R from S2C, [Save to disk]
  • Re-refined 3g6r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3G6R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3G6R
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3G6R, from MSDmotif at EBI
  • Fold representative 3g6r from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3g6r_B] [3g6r] [3g6r_C] [3g6r_A] [3g6r_D]
  • SWISS-PROT database: [P06536]
  • Domain organization of [GCR_RAT] by SWISSPFAM
  • Domain found in 3G6R: [ZnF_C4 ] by SMART
  • Other resources with information on 3G6R
  • Community annotation for 3G6R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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