3GCD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AZ0, IHP, NA enzyme
Gene VC
Primary referenceMechanistic and structural insights into the proteolytic activation of Vibrio cholerae MARTX toxin., Shen A, Lupardus PJ, Albrow VE, Guzzetta A, Powers JC, Garcia KC, Bogyo M, Nat Chem Biol. 2009 May 24;5(7):469-478. PMID:19465933
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk]
  • Biological Unit Coordinates (3gcd.pdb1.gz) 68 Kb
  • Biological Unit Coordinates (3gcd.pdb2.gz) 69 Kb
  • Biological Unit Coordinates (3gcd.pdb3.gz) 69 Kb
  • Biological Unit Coordinates (3gcd.pdb4.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 3GCD
  • CSU: Contacts of Structural Units for 3GCD
  • Likely Quarternary Molecular Structure file(s) for 3GCD
  • Structure Factors (408 Kb)
  • Retrieve 3GCD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GCD from S2C, [Save to disk]
  • Re-refined 3gcd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GCD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gcd] [3gcd_A] [3gcd_B] [3gcd_C] [3gcd_D]
  • SWISS-PROT database: [Q9KS12]

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