3GDP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, FAD, FUC, FUL, IPA, MAN, NAG, NDG	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Substrate Binding in the FAD-Dependent Hydroxynitrile Lyase from Almond Provides Insight into the Mechanism of Cyanohydrins Formation and Explains the Absence of Dehydrogenation Activity., Dreveny I, Andryushkova A, Glieder A, Gruber K, Kratky C, Biochemistry. 2009 Mar 3. PMID:19256550

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk] Biological Unit Coordinates (3gdp.pdb1.gz) 101 Kb Biological Unit Coordinates (3gdp.pdb2.gz) 100 Kb LPC: Ligand-Protein Contacts for 3GDP CSU: Contacts of Structural Units for 3GDP Likely Quarternary Molecular Structure file(s) for 3GDP Structure Factors (1190 Kb) Retrieve 3GDP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GDP from S2C, [Save to disk] Re-refined 3gdp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GDP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gdp] [3gdp_A] [3gdp_B] SWISS-PROT database: [Q945K2]

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