3GDS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MIS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceOMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism., Sohn J, Grant RA, Sauer RT, Structure. 2009 Oct 14;17(10):1411-21. PMID:19836340
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (3gds.pdb1.gz) 134 Kb
  • LPC: Ligand-Protein Contacts for 3GDS
  • CSU: Contacts of Structural Units for 3GDS
  • Likely Quarternary Molecular Structure file(s) for 3GDS
  • Structure Factors (129 Kb)
  • Retrieve 3GDS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GDS from S2C, [Save to disk]
  • Re-refined 3gds structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GDS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gds] [3gds_A] [3gds_B]
  • SWISS-PROT database: [P0AEE3]
  • Domain found in 3GDS: [PDZ ] by SMART

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