3GDZ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, MSE enzyme
Gene KPN78578 ; KPN
Gene
Ontology
ChainFunctionProcessComponent
A, C, B, D


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]
  • Biological Unit Coordinates (3gdz.pdb1.gz) 19 Kb
  • Biological Unit Coordinates (3gdz.pdb2.gz) 19 Kb
  • Biological Unit Coordinates (3gdz.pdb3.gz) 19 Kb
  • Biological Unit Coordinates (3gdz.pdb4.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 3GDZ
  • CSU: Contacts of Structural Units for 3GDZ
  • Likely Quarternary Molecular Structure file(s) for 3GDZ
  • Structure Factors (287 Kb)
  • Retrieve 3GDZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GDZ from S2C, [Save to disk]
  • Re-refined 3gdz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GDZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gdz] [3gdz_A] [3gdz_B] [3gdz_C] [3gdz_D]
  • SWISS-PROT database: [A6TB43]
  • Domain found in 3GDZ: [Arg_tRNA_synt_N ] by SMART

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