3GFW	Transferase	date	Feb 27, 2009
title	Crystal Structure Of Human Dual Specificity Protein Kinase ( Complex With A Pyrolo-Pyridin Ligand
authors	P.Filippakopoulos, M.Soundararajan, H.Choi, T.Keates, J.M.Elkins O.Fedorov, S.S.Picaud, A.C.W.Pike, F.Von Delft, C.H.Arrowsmith, A.Edwards, J.Weigelt, C.Bountra, N.Grey, S.Knapp, Structural Gen Consortium (Sgc)
compound		source
Molecule: Dual Specificity Protein Kinase Ttk Chain: A Fragment: Unp Residues 519-808 Synonym: Phosphotyrosine Picked Threonine-Protein Kinase, P Ec: 2.7.12.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mps1l1, Ttk Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: I 2 2 2	R_factor 0.204 R_Free 0.239
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.969 114.686 111.174 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.74 Å
ligand	7PE, S22 BindingDB	enzyme	Transferase E.C.2.7.12.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Small-molecule kinase inhibitors provide insight into Mps1 cell cycle function., Kwiatkowski N, Jelluma N, Filippakopoulos P, Soundararajan M, Manak MS, Kwon M, Choi HG, Sim T, Deveraux QL, Rottmann S, Pellman D, Shah JV, Kops GJ, Knapp S, Gray NS, Nat Chem Biol. 2010 May;6(5):359-68. Epub 2010 Apr 11. PMID:20383151

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (3gfw.pdb1.gz) 41 Kb LPC: Ligand-Protein Contacts for 3GFW CSU: Contacts of Structural Units for 3GFW Likely Quarternary Molecular Structure file(s) for 3GFW Structure Factors (189 Kb) Retrieve 3GFW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GFW from S2C, [Save to disk] Re-refined 3gfw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GFW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GFW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GFW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gfw_A] [3gfw] SWISS-PROT database: [P33981] Domain organization of [TTK_HUMAN] by SWISSPFAM Domain found in 3GFW: [S_TKc ] by SMART

Other resources with information on 3GFW

Community annotation for 3GFW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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