3GHB	Immune System	date	Mar 03, 2009
title	Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex With W2rw020
authors	X.P.Kong, V.J.Burke
compound		source
Molecule: Fab 447-52d, Light Chain Chain: L, M		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: B Cell
Molecule: Fab 447-52d, Heavy Chain Chain: H, I		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: B Cell
Molecule: Envelope Glycoprotein Chain: P, Q Engineered: Yes		Synthetic: Yes Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676
symmetry	Space Group: P 1 21 1	R_factor 0.196 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.273 76.214 113.915 90.00 101.25 90.00
method	X-Ray Diffraction	resolution	2.25 Å
ligand	SO4	enzyme
Primary reference	Structural basis of the cross-reactivity of genetically related human anti-HIV-1 mAbs: implications for design of V3-based immunogens., Burke V, Williams C, Sukumaran M, Kim SS, Li H, Wang XH, Gorny MK, Zolla-Pazner S, Kong XP, Structure. 2009 Nov 11;17(11):1538-46. PMID:19913488

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk] Biological Unit Coordinates (3ghb.pdb1.gz) 78 Kb Biological Unit Coordinates (3ghb.pdb2.gz) 74 Kb LPC: Ligand-Protein Contacts for 3GHB CSU: Contacts of Structural Units for 3GHB Structure Factors (667 Kb) Retrieve 3GHB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GHB from S2C, [Save to disk] Re-refined 3ghb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GHB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ghb_P] [3ghb] [3ghb_M] [3ghb_H] [3ghb_Q] [3ghb_I] [3ghb_L] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3GHB: [IG_like] [IGv ] by SMART

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