3GLI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ADP, BEF, MG, ZN enzyme
note 3GLI is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
E, J
  • DNA-directed DNA polymerase ...
  • 3'-5' exonuclease activity


    • F, A
  • DNA-directed DNA polymerase ...


    • I, C, G, B, H, D


    O, P


    Primary referenceThe mechanism of ATP-dependent primer-template recognition by a clamp loader complex., Simonetta KR, Kazmirski SL, Goedken ER, Cantor AJ, Kelch BA, McNally R, Seyedin SN, Makino DL, O'Donnell M, Kuriyan J, Cell. 2009 May 15;137(4):659-71. PMID:19450514
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1236 Kb) [Save to disk]
  • Biological Unit Coordinates (3gli.pdb1.gz) 615 Kb
  • Biological Unit Coordinates (3gli.pdb2.gz) 616 Kb
  • LPC: Ligand-Protein Contacts for 3GLI
  • CSU: Contacts of Structural Units for 3GLI
  • Likely Quarternary Molecular Structure file(s) for 3GLI
  • Structure Factors (595 Kb)
  • Retrieve 3GLI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GLI from S2C, [Save to disk]
  • Re-refined 3gli structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GLI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gli] [3gli_A] [3gli_B] [3gli_C] [3gli_D] [3gli_E] [3gli_F] [3gli_G] [3gli_H] [3gli_I] [3gli_J] [3gli_K] [3gli_L] [3gli_M] [3gli_N] [3gli_O] [3gli_P]
  • SWISS-PROT database: [P06710] [P28630] [P28631] [P28632]
  • Domain found in 3GLI: [AAA ] by SMART

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