3GPJ		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SY2	enzyme
Gene Ontology	Chain Function Process Component 1, M B, P proteasome core complex, alp... C, Q E, S proteasome core complex, alp... G, U proteasome core complex, alp... H, K, V, Y J, X endopeptidase activator acti... proteasome core complex, bet... L, Z N, 2 proteasome core complex, bet... O, A proteasome core complex, alp... R, D proteasome core complex, alp... T, F W, I endopeptidase activator acti... proteasome core complex, bet...
Primary reference	Synthetic and structural studies on syringolin A and B reveal critical determinants of selectivity and potency of proteasome inhibition., Clerc J, Groll M, Illich DJ, Bachmann AS, Huber R, Schellenberg B, Dudler R, Kaiser M, Proc Natl Acad Sci U S A. 2009 Apr 21;106(16):6507-12. Epub 2009 Apr 9. PMID:19359491

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1017 Kb) [Save to disk] Biological Unit Coordinates (3gpj.pdb1.gz) 1010 Kb LPC: Ligand-Protein Contacts for 3GPJ CSU: Contacts of Structural Units for 3GPJ Likely Quarternary Molecular Structure file(s) for 3GPJ Structure Factors (1619 Kb) Retrieve 3GPJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GPJ from S2C, [Save to disk] Re-refined 3gpj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GPJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gpj] [3gpj_1] [3gpj_2] [3gpj_A] [3gpj_B] [3gpj_C] [3gpj_D] [3gpj_E] [3gpj_F] [3gpj_G] [3gpj_H] [3gpj_I] [3gpj_S] [3gpj_J] [3gpj_K] [3gpj_L] [3gpj_T] [3gpj_M] [3gpj_N] [3gpj_U] [3gpj_O] [3gpj_P] [3gpj_Q] [3gpj_R] [3gpj_V] [3gpj_W] [3gpj_X] [3gpj_Y] [3gpj_Z] SWISS-PROT database: [P40302] [P23639] [P21242] [P23638] [P32379] [P21243] [P40303] [P23724] [P22141] [P25451] [P30657] [P30656] [P38624] [P25043] Domain found in 3GPJ: [Proteasome_A_N ] by SMART

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