3GSS Transferase date Oct 29, 1996
title Human Glutathione S-Transferase P1-1 In Complex With Ethacry Glutathione Conjugate
authors A.J.Oakley, J.Rossjohn, M.W.Parker
compound source
Molecule: Glutathione S-Transferase P1-1
Chain: A, B
Synonym: Gst
Ec: 2.5.1.18
Engineered: Yes
Other_details: Complexed With Ethacrynic Acid-Glutathione C
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Ubiquitous
Cellular_location: Cytoplasm
Gene: Gstp1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bmh 7118
Expression_system_cellular_location: Cytoplasm
Expression_system_plasmid: Pgst-1
Expression_system_gene: Gstp1
symmetry Space Group: C 1 2 1
R_factor 0.206 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.657 89.347 68.596 90.00 97.44 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand EAA, GSH, MES, SO4 BindingDB enzyme Transferase E.C.2.5.1.18 BRENDA
related structures by homologous chain: 22GS, 2GSS
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • glutathione peroxidase activ...
  • protein binding


  • Primary referenceThe three-dimensional structure of the human Pi class glutathione transferase P1-1 in complex with the inhibitor ethacrynic acid and its glutathione conjugate., Oakley AJ, Rossjohn J, Lo Bello M, Caccuri AM, Federici G, Parker MW, Biochemistry 1997 Jan 21;36(3):576-85. PMID:9012673
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (3gss.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 3GSS
  • CSU: Contacts of Structural Units for 3GSS
  • Likely Quarternary Molecular Structure file(s) for 3GSS
  • Retrieve 3GSS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GSS from S2C, [Save to disk]
  • View 3GSS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3GSS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3GSS, from MSDmotif at EBI
  • Genome occurence of 3GSS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3gssa2, region A:2-76 [Jmol] [rasmolscript] [script source]
        - Domain d3gssa1, region A:77-209 [Jmol] [rasmolscript] [script source]
        - Domain d3gssb2, region B:2-76 [Jmol] [rasmolscript] [script source]
        - Domain d3gssb1, region B:77-209 [Jmol] [rasmolscript] [script source]
  • Fold representative 3gss from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gss] [3gss_B] [3gss_A]
  • SWISS-PROT database: [P09211]
  • Domain organization of [GSTP1_HUMAN] by SWISSPFAM
  • Other resources with information on 3GSS
  • Community annotation for 3GSS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 3GSS from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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