3GW5 Hydrolase Hydrolase Inhibitor date Mar 31, 2009
title Crystal Structure Of Human Renin Complexed With A Novel Inhi
authors Z.Wu, B.M.Mckeever
compound source
Molecule: Renin
Chain: A, B
Synonym: Angiotensinogenase
Ec: 3.4.23.15
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ren
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcdna3.1
symmetry Space Group: P 21 21 21
R_factor 0.210 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.203 97.069 149.546 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 72X, CL, GOL, NAG BindingDB enzyme Hydrolase E.C.3.4.23.15 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDesign and optimization of renin inhibitors: Orally bioavailable alkyl amines., Tice CM, Xu Z, Yuan J, Simpson RD, Cacatian ST, Flaherty PT, Zhao W, Guo J, Ishchenko A, Singh SB, Wu Z, Scott BB, Bukhtiyarov Y, Berbaum J, Mason J, Panemangalore R, Cappiello MG, Muller D, Harrison RK, McGeehan GM, Dillard LW, Baldwin JJ, Claremon DA, Bioorg Med Chem Lett. 2009 Jul 1;19(13):3541-5. Epub 2009 May 5. PMID:19457666
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (3gw5.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (3gw5.pdb2.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 3GW5
  • CSU: Contacts of Structural Units for 3GW5
  • Likely Quarternary Molecular Structure file(s) for 3GW5
  • Structure Factors (621 Kb)
  • Retrieve 3GW5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GW5 from S2C, [Save to disk]
  • Re-refined 3gw5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GW5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3GW5
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3GW5, from MSDmotif at EBI
  • Fold representative 3gw5 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gw5_B] [3gw5] [3gw5_A]
  • SWISS-PROT database: [P00797]
  • Domain organization of [RENI_HUMAN] by SWISSPFAM
  • Other resources with information on 3GW5
  • Community annotation for 3GW5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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