3GWV Transport Protein date Apr 01, 2009
title Leucine Transporter Leut In Complex With R-Fluoxetine
authors Z.Zhou, J.Zhen, N.K.Karpowich, C.J.Law, M.E.A.Reith, D.N.Wang
compound source
Molecule: Transporter
Chain: A
Engineered: Yes
 Organism_scientific: Aquifex Aeolicus
Organism_taxid: 224324
Strain: Vf5
Gene: Aq_2077, Leut, Snf
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbad
symmetry Space Group: C 1 2 1
R_factor 0.201 R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
87.813 87.390 81.154 90.00 95.67 90.00
method X-Ray Diffractionresolution 2.35 Å
ligand LEU, NA, RFX enzyme
note 3GWV (Molecule of the Month:pdb164)
Gene AQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAntidepressant specificity of serotonin transporter suggested by three LeuT-SSRI structures., Zhou Z, Zhen J, Karpowich NK, Law CJ, Reith ME, Wang DN, Nat Struct Mol Biol. 2009 Jun;16(6):652-7. Epub 2009 May 10. PMID:19430461
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (3gwv.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (3gwv.pdb2.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 3GWV
  • CSU: Contacts of Structural Units for 3GWV
  • Likely Quarternary Molecular Structure file(s) for 3GWV
  • Structure Factors (183 Kb)
  • Retrieve 3GWV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GWV from S2C, [Save to disk]
  • Re-refined 3gwv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GWV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3GWV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3GWV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gwv] [3gwv_A]
  • SWISS-PROT database: [O67854]
  • Belongs to the neurotransmitter:sodium symporter (nss) family according to TCDB.
  • Domain organization of [O67854_AQUAE] by SWISSPFAM
    • Other resources with information on 3GWV
  • Community annotation for 3GWV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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