3GYX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FAD, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E, C, I, G, K


B, L, F, J, D, H


Primary referenceCrystal structure of Adenylylsulfate reductase from Desulfovibrio gigas suggests a potential self-regulation mechanism involving the C terminus of the beta-subunit., Chiang YL, Hsieh YC, Fang JY, Liu EH, Huang YC, Chuankhayan P, Jeyakanthan J, Liu MY, Chan SI, Chen CJ, J Bacteriol. 2009 Dec;191(24):7597-608. Epub 2009 Oct 9. PMID:19820092
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (775 Kb) [Save to disk]
  • Biological Unit Coordinates (3gyx.pdb1.gz) 136 Kb
  • Biological Unit Coordinates (3gyx.pdb2.gz) 136 Kb
  • Biological Unit Coordinates (3gyx.pdb3.gz) 136 Kb
  • Biological Unit Coordinates (3gyx.pdb4.gz) 136 Kb
  • Biological Unit Coordinates (3gyx.pdb5.gz) 135 Kb
  • Biological Unit Coordinates (3gyx.pdb6.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 3GYX
  • CSU: Contacts of Structural Units for 3GYX
  • Structure Factors (1110 Kb)
  • Retrieve 3GYX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GYX from S2C, [Save to disk]
  • Re-refined 3gyx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3GYX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gyx] [3gyx_A] [3gyx_B] [3gyx_C] [3gyx_D] [3gyx_E] [3gyx_F] [3gyx_G] [3gyx_H] [3gyx_I] [3gyx_J] [3gyx_K] [3gyx_L]
  • SWISS-PROT database: [D2YW41] [D2YW42]

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