3H44 Hydrolase Cytokine date Apr 17, 2009
title Crystal Structure Of Insulin Degrading Enzyme In Complex With Macrophage Inflammatory Protein 1 Alpha
authors M.Ren, Q.Guo, W.J.Tang
compound source
Molecule: Insulin-Degrading Enzyme
Chain: A, B
Fragment: Residues 42-1019
Synonym: Insulin Protease, Insulinase, Insulysin
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ide
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Proex-H6

Molecule: C-C Motif Chemokine 3
Chain: C, D
Fragment: Residues 23-92
Synonym: Small-Inducible Cytokine A3, Macrophage Inflammatory Protein 1-Alpha, Mip-1-Alpha, Tonsillar Lymphocyte Ld78 Alpha Protein, G0g1 Switch Regulatory Protein 19-1, G0s19-1 Protein, Sis-Beta, Pat 464.1, Ld78- Alpha;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ccl3, G0s19-1, Mip1a, Mip1alpha, Scya3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-32a
symmetry Space Group: P 65
R_factor 0.183 R_Free 0.237
length a length b length c angle alpha angle beta angle gamma
262.737 262.737 90.502 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand DIO, ZN enzyme Hydrolase E.C. BRENDA
A, B
  • virus receptor activity

  • D, C

    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (326 Kb) [Save to disk]
  • Biological Unit Coordinates (3h44.pdb1.gz) 319 Kb
  • Biological Unit Coordinates (3h44.pdb2.gz) 318 Kb
  • Biological Unit Coordinates (3h44.pdb3.gz) 162 Kb
  • Biological Unit Coordinates (3h44.pdb4.gz) 161 Kb
  • LPC: Ligand-Protein Contacts for 3H44
  • CSU: Contacts of Structural Units for 3H44
  • Structure Factors (1028 Kb)
  • Retrieve 3H44 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3H44 from S2C, [Save to disk]
  • Re-refined 3h44 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3H44 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3H44
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3H44, from MSDmotif at EBI
  • Fold representative 3h44 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3h44] [3h44_B] [3h44_A] [3h44_D] [3h44_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3H44: [SCY ] by SMART
  • Other resources with information on 3H44
  • Community annotation for 3H44 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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