3H92 Structural Genomics, Unknown Function date Apr 29, 2009
title The Crystal Structure Of One Domain Of The Protein With Unkn Function From Methanocaldococcus Jannaschii
authors R.Zhang, C.Hatzos, S.Moy, A.Joachimiak, Midwest Center For Struc Genomics (Mcsg)
compound source
Molecule: Uncharacterized Atp-Binding Protein Mjecl15
Chain: A
Fragment: Residues 274-365
Engineered: Yes
 Organism_scientific: Methanocaldococcus Jannaschii
Organism_common: Methanococcus Jannaschii
Organism_taxid: 2190
Strain: Dsm 2661
Gene: Gi:1522655, Mjecl15
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 41
R_factor 0.202 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.501 50.501 42.305 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand MSE, PG6 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (21 Kb) [Save to disk]
  • Biological Unit Coordinates (3h92.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 3H92
  • CSU: Contacts of Structural Units for 3H92
  • Likely Quarternary Molecular Structure file(s) for 3H92
  • Structure Factors (43 Kb)
  • Retrieve 3H92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3H92 from S2C, [Save to disk]
  • Re-refined 3h92 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3H92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3H92
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3H92, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3h92_A] [3h92]
  • SWISS-PROT database: [Q60277]
  • Domain organization of [Y3515_METJA] by SWISSPFAM
    • Other resources with information on 3H92
  • Community annotation for 3H92 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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