3HEG	Transferase	date	May 08, 2009
title	P38 In Complex With Sorafenib
authors	H.V.Namboodiri, M.Karpusas
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Fragment: Kinase Domain, Unp Residues 5-352 Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug-Binding Csaid-Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a; Ec: 2.7.11.24 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Csbp, Csbp1, Csbp2, Cspb1, Mapk14, Mxi2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta Expression_system_vector_type: De3
symmetry	Space Group: P 21 21 21	R_factor 0.236 R_Free 0.309
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.492 74.249 77.843 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	BAX BindingDB	enzyme	Transferase E.C.2.7.11.24 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Analysis of imatinib and sorafenib binding to p38alpha compared with c-Abl and b-Raf provides structural insights for understanding the selectivity of inhibitors targeting the DFG-out form of protein kinases., Namboodiri HV, Bukhtiyarova M, Ramcharan J, Karpusas M, Lee Y, Springman EB, Biochemistry. 2010 May 4;49(17):3611-8. PMID:20337484

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk] Biological Unit Coordinates (3heg.pdb1.gz) 58 Kb LPC: Ligand-Protein Contacts for 3HEG CSU: Contacts of Structural Units for 3HEG Structure Factors (113 Kb) Retrieve 3HEG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HEG from S2C, [Save to disk] Re-refined 3heg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3HEG in 3D

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 3HEG, from MSDmotif at EBI Fold representative 3heg from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3heg] [3heg_A] SWISS-PROT database: [Q16539] Domain organization of [MK14_HUMAN] by SWISSPFAM Domain found in 3HEG: [S_TKc ] by SMART

Other resources with information on 3HEG

Community annotation for 3HEG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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